Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  161 bits (408), Expect = 1e-44
 Identities = 100/292 (34%), Positives = 157/292 (53%), Gaps = 13/292 (4%)

Query: 9   ADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGEL 68
           A+I  FV + +LG+F++AA  LG+++S VS+++S LE ++GV L+ RTTR L LTDAG  
Sbjct: 5   ANIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQ 64

Query: 69  FYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRI 128
           +Y    QA + ++QA  A        +G L++ S+    G+  IA + S F ++ P + +
Sbjct: 65  YYEYVHQAAALMQQAQDALASQQGAVQGSLKV-SLPNVFGQRHIAPLLSEFSRQYPTINL 123

Query: 129 HLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQ 188
            +      VDL++EG D+  R+G L D+S VA KL        ASP Y        HP+ 
Sbjct: 124 EVSLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYL---AHQSHPRS 180

Query: 189 LAD---HRCLTGSVKR----WSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIR 241
           LAD   H CL  S  R    WS++ +   +   +   G+++  N  V+ R  L   GI  
Sbjct: 181 LADLRGHNCLFYSYFRGGLEWSFERR--GEVSRIKPRGNIKVNNSEVIRRLLLDGMGIAL 238

Query: 242 VPTFYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSKR 293
           +P +   +ELA G LV V  D+  P+     +  + ++ P RL+ FI+F K+
Sbjct: 239 MPRYLVEEELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFLKQ 290