Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  162 bits (411), Expect = 7e-45
 Identities = 97/288 (33%), Positives = 157/288 (54%), Gaps = 6/288 (2%)

Query: 11  IRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFY 70
           ++AF  + + G+FTKAA+ LG+S   VS+ +SQLE  + V L+ RTTR +++T+AG  ++
Sbjct: 9   MKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTEAGRAYF 68

Query: 71  RQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRIHL 130
            +C+Q L  IE+   A  +  + A G L++ S     G   +      F Q++PDVR+ +
Sbjct: 69  ERCQQVLIDIEEMDNALTNLSETASGLLKV-SAPMSFGIHHLPSALVQFQQQHPDVRLDI 127

Query: 131 DFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQLA 190
             +  +VDL+E+G DVA R+G+L  +S +A+KLT I++   ASP Y    G+P+ P  L 
Sbjct: 128 TLTDKKVDLLEDGVDVALRIGQLTSSSLIAKKLTPIKLVVCASPEYLAERGEPKTPADLI 187

Query: 191 DHRCLTGSVKRWSY---QHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYC 247
            H  L  S         +  E    L +P   DL C NG +LV AA+A  GI+  PTF  
Sbjct: 188 HHNYLHFSYSDLGAAFGRFGEHFSALKIP--SDLACNNGDMLVEAAIAGRGIVVQPTFLV 245

Query: 248 HQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSKRYF 295
            + L  G+L  +  D+         +Y   K+   +++ F++   +Y+
Sbjct: 246 SKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQYY 293