Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  165 bits (417), Expect = 1e-45
 Identities = 90/283 (31%), Positives = 158/283 (55%), Gaps = 3/283 (1%)

Query: 11  IRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFY 70
           +  FV +A+  +FTKA + LG+S + VSRQ+  LE  +   L+ RTTR +S+T+ G L+Y
Sbjct: 7   VSEFVAVAETESFTKAGKRLGISTAQVSRQVGALEQRLDTKLLYRTTRKVSMTEEGHLYY 66

Query: 71  RQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRIHL 130
           R C Q L  +E+A  A        +G LR+ +   + GE+ I  + + F+   P+V + +
Sbjct: 67  RHCRQVLDGLEEAERALSSLRGLPQGLLRMTAPVAY-GEKYILPVVNDFLLAYPNVEVDI 125

Query: 131 DFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQLA 190
             ++ +V L++ G D+A R+GKL D+S +A+++++      ASP Y    G+P    +L+
Sbjct: 126 ALTNRQVRLVDAGIDLAIRIGKLADSSLIAKRISQRINYVCASPDYLKRFGEPHSLSELS 185

Query: 191 DHRCLTGSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYCHQE 250
            H CL G+   W +  +  ++ L   + G+L+C  G  L  AAL   G++++P +Y  Q+
Sbjct: 186 RHNCLIGNHDYWRFLEQGRERQL--KIKGNLRCNTGHGLRDAALKGLGLVQLPNYYIGQD 243

Query: 251 LARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSKR 293
           L  G LV V   +  P+     +Y ++++   ++K  +EF  R
Sbjct: 244 LKAGRLVSVLNAYQEPNEGVWALYPQNRHLSPKVKLMVEFLDR 286