Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (403), Expect = 6e-44
 Identities = 96/290 (33%), Positives = 158/290 (54%), Gaps = 7/290 (2%)

Query: 8   LADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGE 67
           L  I  F  +A+ G+F+ AA +LG+S+S VS Q++ LE+ +GV L+ RTTRSLSLT+AG+
Sbjct: 5   LEPIAIFTHVARAGSFSSAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTEAGQ 64

Query: 68  LFYRQCEQALSSIEQAVLAAVDDVQEA-RGELRINSVGGHIGEELIADICSAFMQENPDV 126
           L Y Q E+ L   +QAV A+V ++ +A RG L++  +    G   I      FM  +P++
Sbjct: 65  LLYAQGEELLRDADQAV-ASVHNLNDATRGVLKV-GISQSFGTMHIIPALPDFMARHPEL 122

Query: 127 RIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHP 186
            + +    H+VD++ EG D+   M +      VAR L + +    ASP Y    G P+ P
Sbjct: 123 ELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLAASPEYVAKHGYPERP 182

Query: 187 KQLADHRCLT--GSVKRWS-YQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVP 243
           +QL DH CL   G     S +Q K+     ++ V G+ +  N   L  AA++  G++ + 
Sbjct: 183 EQLVDHNCLVYHGEWHEHSVWQFKKGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVVYLA 242

Query: 244 TFYCHQELARGELVEVFQDWHIP-SVEFSLIYHKDKYQPVRLKRFIEFSK 292
           ++    E+ +G LV +  +W +   +    +Y + K+   ++  FI+F K
Sbjct: 243 SYLLENEIEKGTLVPLLPEWQLTHHLPLQAVYPRRKHLAPKVSAFIDFIK 292