Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  164 bits (416), Expect = 2e-45
 Identities = 98/295 (33%), Positives = 160/295 (54%), Gaps = 4/295 (1%)

Query: 8   LADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGE 67
           ++ IR+FV +A  G+FT+AAE+LG+SR  VSR + ++E  +G+ L+ RTTRS+SL+  GE
Sbjct: 4   ISAIRSFVEVASCGSFTQAAEQLGLSRLQVSRHIQEVERWLGLRLLHRTTRSVSLSVQGE 63

Query: 68  LFYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVR 127
             +  C++ L  +      A    QE  G +RI S  G +G+ L+ D    F +E+P+V+
Sbjct: 64  EAFIYCQKILDEVAALQNRAQRHRQELVGSIRIASPIG-LGQALLFDAVDDFTREHPEVK 122

Query: 128 IHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPK 187
           + L  S   V L++E  D+A R  +  D S +AR+L  I     ASP Y           
Sbjct: 123 VQLQLSDEMVQLVDERVDIALRYTQQPDESLIARRLMHIDSVLCASPDYLAGHEPITSLD 182

Query: 188 QLADHRCLT-GSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFY 246
            +  H CL   S  RW +   +  Q ++  + G+LQ  +  VL++AA+   G+I +P   
Sbjct: 183 DITAHNCLLHASQTRWLF--VKDNQNIEKKISGNLQANDMGVLIKAAMRGKGLIHLPCDL 240

Query: 247 CHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSKRYFEQGVIE 301
            +  LA GELVE+  ++H+P      +Y    YQ   ++ FI+F    ++Q +++
Sbjct: 241 ANAHLASGELVELLPEYHLPGKTLWAVYLSRSYQQHLIRHFIDFLAERWQQDILK 295