Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  152 bits (384), Expect = 9e-42
 Identities = 91/293 (31%), Positives = 154/293 (52%), Gaps = 7/293 (2%)

Query: 7   NLADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAG 66
           +L  +  F  + +   F++AA E G  +S +SR+++QLE  +GV L+ R TR+LSLT  G
Sbjct: 3   DLNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQVG 62

Query: 67  ELFYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDV 126
            LFY+ C+   + +E A         +  G LRI ++     +ELIA++CS FM+  P+V
Sbjct: 63  ALFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRI-AIPVSFSQELIANLCSGFMRLYPNV 121

Query: 127 RIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHP 186
            + + F+ + + L+ EG+D+A + G L+ +  VAR L E +   +ASP Y    G P  P
Sbjct: 122 ELDVQFTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTPATP 181

Query: 187 KQLADHRCLTGSVKR----WSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRV 242
           K+L+DH  +     R    W    K T++T+ V     ++  +  ++ + AL   GI  +
Sbjct: 182 KELSDHSGILLGTSRSAPIWPL-GKGTRKTM-VSFQRKVRVNSPIMVKQLALDDFGIAML 239

Query: 243 PTFYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSKRYF 295
               C  ELA G+LV + Q+W +   +   +Y   +     +  F++F  + F
Sbjct: 240 SNSACKTELANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDFFVKRF 292