Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  165 bits (418), Expect = 1e-45
 Identities = 99/281 (35%), Positives = 150/281 (53%), Gaps = 7/281 (2%)

Query: 14  FVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFYRQC 73
           FV + + G+F+ A ++LG+S+S +S+++SQLE  +G+ L+ RTTRSLSLTDAG  ++   
Sbjct: 10  FVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGARYFEYI 69

Query: 74  EQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRIHLDFS 133
             A+   ++ + A  +  Q  RG LRI SV    G   IA + + F++  PD+++ +   
Sbjct: 70  RPAVQLTQEGLDAISELQQTPRGNLRI-SVPMVFGRLYIAPLIAEFLKRYPDIQLQMQMD 128

Query: 134 SHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQLADHR 193
               DLI  GFD+A R+G+L D+S +ARK+        ASPAY T  G P  P +L  H 
Sbjct: 129 DKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPCELTQHN 188

Query: 194 CLTGSV----KRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYCHQ 249
           CL  S       WS+   +  Q   V   G+ Q  N   + +A L   GI  +P F    
Sbjct: 189 CLFYSYFQDGVEWSFHSPDGMQR--VQPKGNYQVNNSDAINQACLDGLGIANLPRFIVEP 246

Query: 250 ELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEF 290
           +L  G L  +  D+ +P      +Y + KYQP ++   IEF
Sbjct: 247 DLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEF 287