Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  156 bits (394), Expect = 6e-43
 Identities = 94/281 (33%), Positives = 145/281 (51%), Gaps = 7/281 (2%)

Query: 14  FVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFYRQC 73
           FV + + G+F+ A ++LG+S+S +S++++QLE  +G+ L+ RTTRSLSLTDAG  ++   
Sbjct: 10  FVTVVECGSFSAAGQKLGLSKSAISKRITQLEQHLGIQLLQRTTRSLSLTDAGARYFEYI 69

Query: 74  EQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRIHLDFS 133
             A+   ++ + A  +  Q  +G LRI SV    G   IA + + F++  PD+++ +   
Sbjct: 70  RPAVQLTQEGLDAISELQQTPKGNLRI-SVPMVFGRLYIAPLIAEFLKRYPDIQLQMQMD 128

Query: 134 SHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQLADHR 193
               DLI  GFD+A R+G+L D+S +ARK+        ASPAY    G P  P  L  H 
Sbjct: 129 DKTTDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLAQHGSPMTPSGLTQHN 188

Query: 194 CLTGSV----KRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYCHQ 249
           CL  S       WS+      Q   V   G+ Q  N   + +A L   GI  +P F    
Sbjct: 189 CLFYSYFQDGVEWSFHSPYGVQR--VQPKGNYQVNNSDAIHQACLDGLGIANLPRFIVES 246

Query: 250 ELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEF 290
           +L  G L  +  D+ +P      +Y + KY P ++   I F
Sbjct: 247 DLQAGRLQTILTDFPLPEHGIYAVYPQRKYLPTKVTVLIGF 287