Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  212 bits (539), Expect = 5e-59
 Identities = 134/375 (35%), Positives = 210/375 (56%), Gaps = 13/375 (3%)

Query: 403 DEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVG----NGISKPIRDSISQIQRMSR 458
           D  +++ AK + +  +     +  G V+A +AA ++G      IS+PI  ++   QR+++
Sbjct: 190 DRQISEDAKAATQQEVTAKTVLYSGIVVAFIAALLLGMFISRLISRPIAVAVDCAQRIAQ 249

Query: 459 DNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRN 518
             DLT  ++    DE  QL +AL  M + L+ TI Q A  +D+L S  + +T        
Sbjct: 250 -GDLTQHITSNSRDEAGQLLKALGDMQTSLKTTIQQIASASDQLASAAEELTAVTDDGSR 308

Query: 519 SVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARD--- 575
           ++  Q++      TAV EM++++ EV+    R A    +A+Q      S G + AR    
Sbjct: 309 ALIRQNDEIQQAATAVTEMTSAVEEVA----RNAVSTSQASQSTSSQASEGRDQARSAVQ 364

Query: 576 -MTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRG 634
            + +  Q++ S+   +  L  + + I  VLDVI+ IAEQTNLLALNAAIEAARAGEQGRG
Sbjct: 365 AINTATQEITSSTGLVKDLAVQVRDIGKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRG 424

Query: 635 FAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDM 694
           FAVVADEVR LAA+TQ ST EI + I  +Q    S V+ + ++   V        +  + 
Sbjct: 425 FAVVADEVRALAARTQASTGEIESMIHAVQDRADSAVDAMGKSQALVTETQDLARATGEA 484

Query: 695 LKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNEL 754
           L+QI D ++++N+ N+ IATA+E+Q  V  E++ N+ +I D+S        + NA   EL
Sbjct: 485 LEQIADNISQINDRNLVIATASEEQAHVAREVDRNLVNIQDLSTQTAAGANQTNASSQEL 544

Query: 755 SDEAMELSKRMGQFR 769
           S+ A+  +  +G+FR
Sbjct: 545 SNLALSFNSLVGRFR 559



 Score = 32.7 bits (73), Expect = 5e-05
 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 41/187 (21%)

Query: 326 IGTLNSLTGDRAAINQIRSKQSAIGLLKVSSQAVDKALRGESGL-MMESTHASVQLLSAY 384
           I    +L    AAI   R+ +   G   V+ +    A R ++    +ES   +VQ   A 
Sbjct: 400 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTGEIESMIHAVQD-RAD 458

Query: 385 TPLDALGLRWALVTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISK 444
           + +DA+G   ALVTE Q      D+A+ + E +                          +
Sbjct: 459 SAVDAMGKSQALVTETQ------DLARATGEAL--------------------------E 486

Query: 445 PIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNS 504
            I D+ISQI     D +L +  +   S+E   +A+ ++R L ++QD   Q A   ++ N+
Sbjct: 487 QIADNISQI----NDRNLVIATA---SEEQAHVAREVDRNLVNIQDLSTQTAAGANQTNA 539

Query: 505 HTQTITH 511
            +Q +++
Sbjct: 540 SSQELSN 546