Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  230 bits (587), Expect = 2e-64
 Identities = 159/482 (32%), Positives = 255/482 (52%), Gaps = 17/482 (3%)

Query: 304 LVGSDHLMRSQPRLLLEDASAFIG-----TLNSLTGDRAAINQIRSK--QSAIGLLKVSS 356
           +VG+D  +    +LL    S   G      L S  G  AA ++ R+   + A  LL    
Sbjct: 228 IVGADIGVDFMQQLLSSANSQLYGGAGQIALISNNGRLAAYSRDRNLLGKPAAQLLDADE 287

Query: 357 QAVDKAL-RGESGLMMESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKL--- 412
           QA+ K L  G++   ++     V L   ++       RW L+ E+   E + ++ +L   
Sbjct: 288 QALVKQLPAGQTHYRIDHARGRVALFLPFS-FPGTDARWVLMLELPTAEVMKELDQLMVA 346

Query: 413 -SDELIMKVLIAIVIGAVIA---TLAAWMVGNGISKPIRDSISQIQRMSR-DNDLTVRLS 467
             +E    +   +VIG +IA    LA W++   I++P+RD +  +  +S+ + DLT RL+
Sbjct: 347 LGEESRSNLAAMLVIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLN 406

Query: 468 EQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERT 527
               +E+ Q+A   N  L+ LQ  I +   +  K++  ++        T   V  Q    
Sbjct: 407 IDSRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEI 466

Query: 528 DSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAV 587
           + V TAV+EM+A+  +V+  A +AA     A++  + G  +  +    +  +  ++  AV
Sbjct: 467 ELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAV 526

Query: 588 EAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAA 647
           + +  L  +S++I ++L  I++IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA 
Sbjct: 527 DVVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQ 586

Query: 648 KTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNE 707
           KTQ +T EI+  I +LQ  T+ VV  +E++ N   R V    +  + L+ I   ++ +N+
Sbjct: 587 KTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLIND 646

Query: 708 MNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQ 767
           MN QIA+A E+Q  V E+IN N+T+I  V+  V     E +     L+  A +  + + Q
Sbjct: 647 MNNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQ 706

Query: 768 FR 769
           FR
Sbjct: 707 FR 708