Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  208 bits (529), Expect = 7e-58
 Identities = 134/349 (38%), Positives = 192/349 (55%), Gaps = 6/349 (1%)

Query: 421 LIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQA 480
           LI I+   V+A  + W+V   I +PIR  I  I R+S+      R+    +DE+ +LA A
Sbjct: 192 LIMILASVVVALFSLWLVNRRIIEPIRSLIEHIARLSQGK-FADRVDASRADELGRLAVA 250

Query: 481 LNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSAS 540
            N +   L DT  +   +T  L+S +  ++       +   EQ  RTD V TA++EMSA+
Sbjct: 251 ANVLRDFLADTFTRLQQSTSNLDSASGELSAIARLMADGTREQFSRTDQVATAMHEMSAT 310

Query: 541 ITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSI 600
             EVS  A  AA     A+     G +V       +T ++ ++AS  E I RL  +S  I
Sbjct: 311 AQEVSRHAAEAAQAADAADHSAQQGEAVMRATIATITDVSGEIASTAEVIRRLEGDSGRI 370

Query: 601 ASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKI 660
             VL+VI+ IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA +T  ST EI   I
Sbjct: 371 GKVLEVIRGIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESTAEIHQII 430

Query: 661 DRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQR 720
           D +Q    + V  IE       +GV        ML++I + +  + +MN QIATA E+Q 
Sbjct: 431 DTVQTGASNAVRAIESGQARSEQGVGQVTEAGLMLQRITEAVEAIRDMNRQIATAAEEQT 490

Query: 721 GVTEEINANITSISDVSASVTVQVGEVNAIVNE----LSDEAMELSKRM 765
            V E+I+ NIT I+ + A++  Q  E     ++    LS +  E+++R+
Sbjct: 491 AVAEDISRNITEITSI-ATINQQNVERTETASQNLHGLSAQLTEVTQRL 538