Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  194 bits (493), Expect = 1e-53
 Identities = 127/419 (30%), Positives = 218/419 (52%), Gaps = 5/419 (1%)

Query: 355 SSQAVDKALRGESGLMMESTHASVQLLSAYTPLDALGLRWALVTEMQADEALA-DIAKLS 413
           ++ A   + RG+    ++ T  SVQ   A +    + +      + +   AL  ++    
Sbjct: 256 AATAAMDSFRGDLHAYVKGTEFSVQQGQALSARGNVVVSGLYKAQDEIQTALQNELNTRY 315

Query: 414 DELIMKVLIAIVIGAVIATLAAWMVGNGISKPIR---DSISQIQRMSRDNDLTVRLSEQG 470
           D L+++  + I +  ++  L  +   + I + +R   DS+  + R   + DL+ R++   
Sbjct: 316 DALVLQREVVIAMCVIMGLLLLYAFCS-IYRALRLTIDSLLGVTRRLGEGDLSARVAVVS 374

Query: 471 SDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSV 530
            DE+  +A  LN M      +I     T+ +L      +  ++   + S++ Q   T+ V
Sbjct: 375 KDEVADIANGLNLMADAFASSISHMDRTSYELTDVASRLGASIGLAKQSMNAQQAETEQV 434

Query: 531 VTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAI 590
            TA+NEM+AS+ +V++  + AA    EAN     G+ + ++    + ++ +++  + + +
Sbjct: 435 ATAINEMTASVADVAQNTEGAALAADEANTASRNGLRIMHQAHSTIQALAEEVELSAQKV 494

Query: 591 ARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQ 650
             L   SQSI  V+ VI  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA++TQ
Sbjct: 495 QALALHSQSIGGVIQVISTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQ 554

Query: 651 TSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNI 710
            STEEIR  I +LQ  T + V  ++         ++     +  L  I   +  + EMN 
Sbjct: 555 ASTEEIRGIIQQLQSATDAAVQQMQAGQQKAHACISAASDASGSLSSISQGVERIVEMNT 614

Query: 711 QIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           QIA+A  QQ  V+E+IN N+  I + S ++ + +       +EL+  A ++   + +F+
Sbjct: 615 QIASAAVQQHAVSEDINRNVMEIRNSSGTLMLGIDNNAVTADELARVASDMRNVVARFK 673