Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  199 bits (505), Expect = 4e-55
 Identities = 128/359 (35%), Positives = 202/359 (56%), Gaps = 14/359 (3%)

Query: 418 MKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRD---NDLTVRLSEQGSDEI 474
           + VL+ ++I A + T+   ++   +++ I D IS   +++ D    DLT +LS  GSDE 
Sbjct: 189 VNVLMIVLIAAFLLTV---VLAIALTRSIVDPISASLKLAEDIAAGDLTRQLSVSGSDEA 245

Query: 475 RQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAV 534
            +L  ALN M  +L+ TI + +  + +L++    +T        ++ +Q+   +   TAV
Sbjct: 246 SRLMTALNTMSGNLRTTIHEISGASAQLSTAAVEMTSITESADRTLQQQNSEIEQAATAV 305

Query: 535 NEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEA----I 590
           NEMSA++ EV+    R AT   +A Q+      +GN+   +  +  Q +   VE     +
Sbjct: 306 NEMSAAVEEVA----RNATSTSQAAQQSSLSADLGNQRVNETLTAMQNLTGLVEGSSAQV 361

Query: 591 ARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQ 650
             L  ++Q I+ VL VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ
Sbjct: 362 TALAGQAQDISKVLGVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQ 421

Query: 651 TSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNI 710
           TST+E+   I  +Q  + + V  + ++   V     T     + L+QI D + E+N  N+
Sbjct: 422 TSTQEVEQMISAIQAGSSATVESMHKSTQEVHVTRKTAEDAGESLRQITDSVLEINNRNL 481

Query: 711 QIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           QIA A+EQQ  V  +++ ++ SI D++   +    +      ELS  A+ L+  + +F+
Sbjct: 482 QIAAASEQQAHVARDVDRSLVSIRDLAVQSSEGTRQTLIASTELSQLAVNLNDLVLRFK 540