Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  200 bits (509), Expect = 1e-55
 Identities = 126/373 (33%), Positives = 204/373 (54%), Gaps = 1/373 (0%)

Query: 397 VTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRM 456
           V + +A++A A       + +  V I I +G +   L AWM    ++ PI DS+S  QR+
Sbjct: 170 VNDAKAEKAGAAANAAYQQTLWMVGIFITVGVITTLLLAWMYTRSLTGPIGDSLSIAQRI 229

Query: 457 SRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGT 516
           +  NDL+  + + G+DE  +L  AL  M S+L++ +     ++ +L + ++ +       
Sbjct: 230 AT-NDLSQDIPQHGTDEAAKLIAALATMQSNLRNALTLIGDSSTQLAATSEEMHAVTEDA 288

Query: 517 RNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDM 576
             ++  Q    +   TAVNEMSA++ EV+  A  A+    +++     G +  +E    +
Sbjct: 289 SRTILRQTNEIEMAATAVNEMSAAVEEVASNAASASEVTSQSSTAAMAGRAQVDETVTAI 348

Query: 577 TSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFA 636
             +  ++      +  L   +  I+ VLDVI+AIAEQTNLLALNAAIEAARAGE GRGFA
Sbjct: 349 NLMVSKVQITSTEVQGLAVMATDISKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFA 408

Query: 637 VVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLK 696
           VVADEVR LA +TQ ST EI   +D +Q  T + V+ +E+ +    + +   +     L 
Sbjct: 409 VVADEVRALAHRTQQSTREIEQMVDSIQTGTGNAVSAMEQTSVQAHKTLEMANGAGKALL 468

Query: 697 QIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSD 756
           +I + ++++NE N+ IATA E+Q  V  E++ ++ SI D+S+  +    +      ELS 
Sbjct: 469 EITESISQINERNLMIATAAEEQAQVAREVDRSLVSIRDLSSQTSEGSNQTAIATAELST 528

Query: 757 EAMELSKRMGQFR 769
            A  L++   QFR
Sbjct: 529 LASSLNRLTKQFR 541