Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  199 bits (507), Expect = 2e-55
 Identities = 128/379 (33%), Positives = 213/379 (56%), Gaps = 9/379 (2%)

Query: 394 WALVTEMQADEALADI-AKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQ 452
           W L + +  D+  A+   +L +  +    I +++  ++ T+        I +P+R ++  
Sbjct: 170 WILGSGVYVDDVAAEFKTQLWNAGMFIAGIVLIMVLLLVTIV-----RSIVRPLRAAVGA 224

Query: 453 IQRM-SRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITH 511
           +  + S ++DLT  L   G+DEI +L    N  ++ L++ + Q  H+   L   +  +  
Sbjct: 225 MASIASGESDLTRTLETHGNDEITELGTHFNAFVAKLRNVVGQLQHSAVALGQASTDLGS 284

Query: 512 NMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEA-NQKGHGGVSVGN 570
           +    ++   +Q ++ D V TAVNE++  + +V++ A+ AA+ +++A +Q   G +++ N
Sbjct: 285 DAEQAQSRSEQQSQQMDLVATAVNEVTYGVQDVAKNAEHAASEMRDAESQAQQGQINIDN 344

Query: 571 ELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGE 630
            L R +  ++  +  AV+ +  L  ES  I SVL+VI +IAEQTNLLALNAAIEAARAGE
Sbjct: 345 SL-RQIEHLSSTIGQAVQVMQSLASESTQIGSVLEVISSIAEQTNLLALNAAIEAARAGE 403

Query: 631 QGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHS 690
           QGRGFAVVADEVR LA +TQ ST EI++ I+RLQK + + V  I +++ +    +   + 
Sbjct: 404 QGRGFAVVADEVRLLAQRTQKSTAEIQSMIERLQKHSDAAVKVIGDSSRSSQLTIEQANQ 463

Query: 691 NTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAI 750
               L  I   L  LN +N  IA+AT QQ  V ++IN N+T  + +S S  +   +  + 
Sbjct: 464 AGQSLTSISQALRNLNSLNASIASATLQQTHVVDDINQNVTQAAQLSQSTALAAEQSTSA 523

Query: 751 VNELSDEAMELSKRMGQFR 769
              L   + EL+  + QFR
Sbjct: 524 SLHLRGLSEELNTLLKQFR 542