Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  205 bits (522), Expect = 4e-57
 Identities = 126/355 (35%), Positives = 207/355 (58%), Gaps = 10/355 (2%)

Query: 420 VLIAIVIGAVIATLA-AWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQLA 478
           ++I ++I   + TL  A ++   I+ PI  ++S  +R++  +DLT  +   G+DE  +L 
Sbjct: 189 IVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIA-SSDLTKEVEVSGTDEAGRLL 247

Query: 479 QALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMS 538
            AL  M  +L+ TI Q A ++ +L + ++ +T     +   +  Q++  +   TAV EMS
Sbjct: 248 SALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVNQAATAVTEMS 307

Query: 539 ASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAV----EAIARLN 594
           A++ EV+  A+ A+    E ++KG G   VG E         ++++S V    E I  L+
Sbjct: 308 AAVDEVARNAESAS----EESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSEQITGLS 363

Query: 595 HESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTE 654
           + +Q+I+ V++VI+AIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ ST+
Sbjct: 364 NRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQVSTQ 423

Query: 655 EIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIAT 714
           EI   I  +Q ++   V  +  +       ++     +  L QI   +  +NE NI IAT
Sbjct: 424 EIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINERNILIAT 483

Query: 715 ATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           A+E+Q  V  E++ N+ SI ++++  +    +  +  NE+S  A+ L++ + +F+
Sbjct: 484 ASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRFK 538