Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  206 bits (525), Expect = 2e-57
 Identities = 129/402 (32%), Positives = 219/402 (54%), Gaps = 6/402 (1%)

Query: 370 MMESTHASVQLLSAYTPLDAL-GLRWALVTEMQADEALADIAKLSDELIMKVLIAIVIGA 428
           + E T    Q L ++TP+  L    W +   +  D+A A +++     ++ VLIA+   A
Sbjct: 228 LREVTLNGQQRLLSFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAV---A 284

Query: 429 VIATLAAWMVGNGISKPIRDSISQIQRMSR-DNDLTVRLSEQGSDEIRQLAQALNRMLSH 487
           VIA L + ++   + +P+ D    +Q +++ + DLT RLS QG DE   L  + N+ +  
Sbjct: 285 VIALLLSLLI-RALMRPLTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAALGGSFNQFVER 343

Query: 488 LQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEF 547
           +  +I + +  T +++  +Q + ++   +     EQ  RT++V  A+NE+ A+  E++  
Sbjct: 344 VHASIVEVSSATLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEIARN 403

Query: 548 AQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVI 607
           A  A+    EA  +   G  V  +    M++++ +++ +   I +LN  +++I  +LDVI
Sbjct: 404 ASDASIQASEARNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVI 463

Query: 608 QAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKET 667
           + I++QTNLLALNAAIEAARAGE GRGFAVVADEVRNLA +TQTS +EI   I  LQ  +
Sbjct: 464 KGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGS 523

Query: 668 QSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEIN 727
           Q  V  + E+  +    V   +     L+ +   + +++ MN  +A ATE+Q  V E +N
Sbjct: 524 QHAVLNMNESQTSSQESVEVANQAGSRLRDVTRRIGDIDGMNQSVAAATEEQTAVVETLN 583

Query: 728 ANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
            +I  I+ ++      + E       LS +A  L + +  F+
Sbjct: 584 IDINQINTLNQQGVANLNETLKDCAALSQQAGRLKQLVDSFK 625