Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  207 bits (527), Expect = 1e-57
 Identities = 148/454 (32%), Positives = 236/454 (51%), Gaps = 31/454 (6%)

Query: 335 DRAAINQIRSKQSAIGLLKV--SSQAVDKALRGESGLMMESTH------ASVQLLSAYTP 386
           ++AA++++ S    +  LK   S    D+  + E+ LM   T       A+  ++ A   
Sbjct: 198 EQAAVSKLDSAIKDLDALKTTFSGTQADQLRQLETSLMAYRTTLQNFKAATGTIVQARKE 257

Query: 387 LDALGLRWALVTE----MQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGI 442
           +   G     ++E    +Q D    + A+     I   L+AI++G +    AA ++   I
Sbjct: 258 MTTQGQDIVKISEDMYKLQLDRRDQESAQARTTQITCTLLAIILGII----AAVIITRQI 313

Query: 443 SKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALNRM-------LSHLQDTICQF 495
           ++P+R++++ + R++   DLT  L+   SDE+  L Q + RM       +  ++D++ Q 
Sbjct: 314 TRPLRETLAVVDRIA-SGDLTQTLAVTRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQI 372

Query: 496 AHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFV 555
           A   ++L++ T+        T   V+ Q   TD V TA++EMSA++ EV+  A++A+   
Sbjct: 373 ASAAEELSAVTEQ-------TSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQASQAA 425

Query: 556 QEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTN 615
             A+++   G  V  E    +  +  ++  +V+A+  L  ES  I  V+DVI+A+AEQTN
Sbjct: 426 SNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKVMDVIKAVAEQTN 485

Query: 616 LLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIE 675
           LLALNAAIEAARAGE GRGFAVVADEVR LA +TQ ST EI T +  LQ  T+ V + + 
Sbjct: 486 LLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAALQSGTRQVSSIML 545

Query: 676 EANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISD 735
            +    V  V         L  I   ++ +  MN QIA A E+Q  V EEI+ +I ++ D
Sbjct: 546 NSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAEEISRSIVNVRD 605

Query: 736 VSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           VS        E  A   EL+    +L   + +FR
Sbjct: 606 VSEQTASASEETAASSVELARLGGQLQTMVSRFR 639