Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  197 bits (502), Expect = 9e-55
 Identities = 125/373 (33%), Positives = 198/373 (53%), Gaps = 9/373 (2%)

Query: 401 QADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDN 460
           QA EA     +  +     + I I +    A +    +   IS PI  +++  +R++   
Sbjct: 178 QAGEAAVASDQTQNSAQRNLYIGIGLSFFAAFVMGLFISRAISTPINTAVTNARRIA-SG 236

Query: 461 DLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSV 520
           DLT+ ++ Q  DE   +  AL+ M  +L+ TI Q +   D+L S  + +      +   +
Sbjct: 237 DLTLPIASQYHDEAGMMLVALSDMQDNLKSTIGQISSAADQLASAAEELNAVTEESSRGL 296

Query: 521 SEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARD----M 576
             Q++      +AVNEM+A++ EV+    R A    EA+++     + G + ARD    +
Sbjct: 297 IRQNDEIQQAASAVNEMTAAVEEVA----RNAMSTSEASRQTSTDAAAGRDQARDAVNAI 352

Query: 577 TSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFA 636
            +++ +++S+   +  L    + I  VLDVI+ IAEQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 353 NTVSAEISSSTTMVEELAGRVREIGQVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFA 412

Query: 637 VVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLK 696
           VVADEVR LAA+TQ ST EI T I  +Q      V  +  +            +    L+
Sbjct: 413 VVADEVRALAARTQASTGEIETMIGSVQASADQAVRAMANSRTLTSNTQTLAQATGQSLE 472

Query: 697 QIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSD 756
           +I   + E+N+ N+ IATA+E+Q  V  E++ N+ +I D+SA       + +A   ELS 
Sbjct: 473 RIAQSVAEINDRNMLIATASEEQSHVAREVDRNLVNIQDLSAQTAAGAHQTSASSQELSR 532

Query: 757 EAMELSKRMGQFR 769
            A+  +  +G+F+
Sbjct: 533 LAISFNNLVGKFK 545