Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  207 bits (528), Expect = 1e-57
 Identities = 146/442 (33%), Positives = 222/442 (50%), Gaps = 17/442 (3%)

Query: 329 LNSLTGDRAAINQIRSKQSAIGLLKVSSQAVDKALRGESGLMMESTHASVQLLSAYTPLD 388
           +N+L GD ++      +Q+  GL            R   G   ++  AS   L   T L 
Sbjct: 210 INTLAGDISSTYSPMLQQAIAGL---------NGYRAAVGKYRDAQAASKAALDKMTTLG 260

Query: 389 ALGLRWA--LVTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPI 446
              L  +  L+T        AD AK    +I    +A+V+G     LAAW++   I+ P+
Sbjct: 261 VSMLATSNDLITRQNKSRD-ADSAKSVQMIIAATALAMVLGI----LAAWVITRQITTPL 315

Query: 447 RDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHT 506
           ++++  ++R++   DL+  L+    DE+ +L   + RM   L++ +        ++ S  
Sbjct: 316 QETLEVVERVA-SGDLSRNLNVDRKDELGKLQATIQRMTVSLRELVGGIRDGVTQIASAA 374

Query: 507 QTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGV 566
           + ++     T   V+ Q   TD V TA++EM+A++ EV+  A+ A+     A+++   G 
Sbjct: 375 EELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASEAAVAADRQARDGE 434

Query: 567 SVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAA 626
            V NE    +  +   + ++ EA+  L  ES  I SVLDVI+++AEQTNLLALNAAIEAA
Sbjct: 435 RVVNEAIAQIERLASAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAA 494

Query: 627 RAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVA 686
           RAGE GRGFAVVADEVR+LA +TQ STEEI   I RLQ  TQ     ++ +       V 
Sbjct: 495 RAGEAGRGFAVVADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTSSVE 554

Query: 687 TCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGE 746
                   L  I   ++ +  MN QIA A E+Q    EEIN +I ++ DVS   +    E
Sbjct: 555 LTRRAGGSLANITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAASEE 614

Query: 747 VNAIVNELSDEAMELSKRMGQF 768
             A   EL+     L   + +F
Sbjct: 615 TAASSVELARLGNHLQVLVSRF 636