Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  245 bits (626), Expect = 5e-69
 Identities = 143/397 (36%), Positives = 227/397 (57%), Gaps = 17/397 (4%)

Query: 378 VQLLSAYTPLDALGLRWALVTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWM 437
           + + S+Y P     + W LV ++   E  A    L DE  +K+L + ++ A+   + +  
Sbjct: 251 MMVASSYLP----SIDWYLVAQVPEAEVFA----LLDEAALKILFSTLLIALAFVVLSGF 302

Query: 438 VGNGISKPIRDSISQIQRMSRD-----NDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTI 492
           V + +SKPI    + + RM RD      DL  RL  QG DE+ QLA   N  +S +QD++
Sbjct: 303 VASSVSKPI----AAVARMFRDIGEGEGDLRQRLPVQGEDELAQLASGFNSFISKIQDSV 358

Query: 493 CQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAA 552
            + A T+++L      ++     T     +Q +RT  VVTA+NEM A++ E++  A +AA
Sbjct: 359 IEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVTAINEMGATVNEIAANAAQAA 418

Query: 553 TFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAE 612
              ++A++    G  V  +    +  +++ ++   E I  L   ++SI S+LDVI+AI+E
Sbjct: 419 EAAKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIESLATHTKSIGSILDVIRAISE 478

Query: 613 QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVN 672
           QTNLLALNAAIEAARAGE GRGFAVVADEVRNLA++T  ST+E++  ID+LQ E+   VN
Sbjct: 479 QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTDEVQVMIDKLQSESARAVN 538

Query: 673 CIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITS 732
            + ++ +    GV+     ++ L  I D +  +++MNIQ+A ATE+Q  V E+IN N+T 
Sbjct: 539 AMSQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQVAAATEEQSTVVEDINRNVTE 598

Query: 733 ISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           I+D++               +L+  A  L + + +F+
Sbjct: 599 INDITQRTAATAQAAARASKDLNALATRLDQLVARFK 635