Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  217 bits (552), Expect = 2e-60
 Identities = 140/383 (36%), Positives = 203/383 (53%), Gaps = 5/383 (1%)

Query: 392 LRWALVTEMQADEALADIA--KLSDELIMKVLIAIVIGAVIATLAA---WMVGNGISKPI 446
           LR  +    QA + L ++A  ++ DE    V +A  + AVIA L A   +M+   I  PI
Sbjct: 237 LRSVIDQSEQATQELRELALHEIHDEEGDSVAMATTLFAVIAVLVAIVTFMIIRAIITPI 296

Query: 447 RDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHT 506
            +    I  + +D +LT+R   QG DEI ++ Q  N M+   +  I Q     + +N   
Sbjct: 297 NNINQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMNESC 356

Query: 507 QTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGV 566
           Q ++ N T   + V  Q   TD V TA+ EM A+I E+++  + AA      +     G 
Sbjct: 357 QELSANATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQVGQ 416

Query: 567 SVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAA 626
               +    + S+ QQ+ ++   +A L  +S +I SVLDVI+ IAEQTNLLALNAAIEAA
Sbjct: 417 QSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAIEAA 476

Query: 627 RAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVA 686
           RAGEQGRGFAVVADEVR+LA +TQ STEEI   I  LQ  T+S+V  +E +         
Sbjct: 477 RAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGESAE 536

Query: 687 TCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGE 746
              S   ML QI   +  + +M+ QIA A E+Q  V  E+N N+  I D++   +     
Sbjct: 537 QAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAAMA 596

Query: 747 VNAIVNELSDEAMELSKRMGQFR 769
                +++ + A  L + + QFR
Sbjct: 597 NAKASDDVRERAEYLQRAVSQFR 619