Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  192 bits (487), Expect = 5e-53
 Identities = 131/384 (34%), Positives = 206/384 (53%), Gaps = 27/384 (7%)

Query: 394 WALVTEMQADEALADIAKLSDELIMKVLIAIVI--GAVIATLAAWMVGNGISKPIRDSIS 451
           W + T +  D    DIA    E   + L+  ++  G V+A L   M+   +++P++ ++ 
Sbjct: 181 WIVGTGIYVD----DIAAQKQEFTWQYLLVFLLVWGPVMALLL--MISRSVTEPLQRTLM 234

Query: 452 QIQRMSR-DNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTD---KLNSHTQ 507
             + ++  + +LT+RL E+G DE+ Q++   N  +  +Q  +     + D   +L+S   
Sbjct: 235 AFKNIAEGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLS 294

Query: 508 TITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVS 567
            + H      NS+ ++   T SV  A+N+MSA+ +EV+  AQ AA   + A+ +      
Sbjct: 295 NVAHQAAHATNSMQQE---TQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNL 351

Query: 568 VGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAAR 627
           V      ++  ++ ++    E    L   S  I  +LDVI  IAEQTNLLALNAAIEAAR
Sbjct: 352 VVTHAMGNVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAAR 411

Query: 628 AGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQ----KETQSVVNCIEEANNTVVR 683
           AGE GRGFAVVADEVR LA++TQ ST+EI   I+ ++    K   SV    ++++NTV  
Sbjct: 412 AGEAGRGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDE 471

Query: 684 GVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQ 743
                    D L  I   + ++N+MN+QIATAT++Q  V  E+N NI  I+++S    V+
Sbjct: 472 TAQV----MDALGLIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEIS----VE 523

Query: 744 VGEVNAIVNELSDEAMELSKRMGQ 767
               +  V   SD   E S++M Q
Sbjct: 524 NLSKSETVGHTSDRIAEDSRQMAQ 547