Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  201 bits (511), Expect = 1e-55
 Identities = 129/352 (36%), Positives = 191/352 (54%), Gaps = 10/352 (2%)

Query: 401 QADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDN 460
           Q+ +A++D    +  + + V I I +  +  TLA   +   I +P++     I R+    
Sbjct: 254 QSMDAISDAESATVTISIVVFILITLVLIGFTLA---IIRSIMEPVQRISDAISRIEATK 310

Query: 461 DLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSV 520
           DLT+R   +  DEI Q+A+  N M+   Q  I +   + + +N   Q ++ N       V
Sbjct: 311 DLTLRCDTKVDDEIGQIARHFNSMVESFQSLIREVLTSVEVVNHSCQELSENSMRASEGV 370

Query: 521 SEQHERTDSVVTAVNEMSASITEVS---EFAQRAATFVQEANQKGHGGVSVGNELARDMT 577
             Q   TD V TA+ EM A+I E++   E A   A    +  Q+G  GV         + 
Sbjct: 371 GRQLNETDMVATAITEMGATIDEIASNTELAAERAGNTHDNAQQGQVGVE---HTIEKIQ 427

Query: 578 SINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAV 637
           ++  Q+  + + ++ L  +S++I SVLDVI+ IAEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 428 ALAAQLTDSAQVVSELEKDSETIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAV 487

Query: 638 VADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQ 697
           VADEVR+LA +TQ STEEI   I  LQ  T+S+V  +E      +       S   +L+Q
Sbjct: 488 VADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEATQRQGIESADQAASAGALLEQ 547

Query: 698 IVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNA 749
           I   +  + +M+ QIA A E+Q  V  E+N N+  I D++A  + Q  + NA
Sbjct: 548 INADVTNIMDMSTQIAAAIEEQSMVASEVNKNVVVIRDIAAE-SAQAADENA 598