Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  216 bits (551), Expect = 2e-60
 Identities = 132/414 (31%), Positives = 221/414 (53%), Gaps = 5/414 (1%)

Query: 359 VDKALRGESGLMMESTHASVQLLSAYTPLDALGLRWALVTEMQ---ADEALADIAKLSDE 415
           +++ L G+SG +        +++  Y  +D +    A +  +Q   A E    +A++ + 
Sbjct: 129 LEQLLGGKSGNIAGQLRE--EIIPLYRVIDPISGTIAELISLQLKVAGEEKDRVAEIYES 186

Query: 416 LIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIR 475
            I   ++  ++ A+ + +    +   + KPI    +Q+  + +D+DLTV   +   DE+ 
Sbjct: 187 SISLFILITLVAAIASIVLGVWINRSVMKPINHIRTQLHTIQQDSDLTVTFEQLNKDELG 246

Query: 476 QLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVN 535
            ++  LN +  HL+  +   A   + ++     +      +   + +Q   T+   TA+N
Sbjct: 247 LISTGLNDVFRHLRGILKGVAEAANSVSDSALALNEFTQISNARIQQQQAETEQTATAMN 306

Query: 536 EMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNH 595
           EM+A++ EV++    AA   + A++    G  +       M +++ Q+ S  E I  L+H
Sbjct: 307 EMTATVNEVAQSTTAAADSARNADRFAANGNDIVQLSISSMQALSMQIQSTSEVITHLSH 366

Query: 596 ESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEE 655
           ESQ I SVL VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ +T+E
Sbjct: 367 ESQHIGSVLSVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQEATQE 426

Query: 656 IRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATA 715
           I T I+ LQ      V  ++     V       +   + L++IV  ++ + EMN  IATA
Sbjct: 427 IETMIETLQSGVNEAVTAMDVGIKQVDDANQQTNKAGEALQEIVASVDNITEMNTHIATA 486

Query: 716 TEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
            E+Q  V E IN +I +ISD+++  T    E+   + +L+  A  + +++  FR
Sbjct: 487 AEEQSSVAESINRSIIAISDIASQSTESALELGHSIAQLTSLADSMRQQVTTFR 540