Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  197 bits (502), Expect = 9e-55
 Identities = 123/377 (32%), Positives = 196/377 (51%), Gaps = 5/377 (1%)

Query: 394 WALVTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQI 453
           W + T +  D    DI +     I K L+  +   +   L   ++   IS P+ D+I+  
Sbjct: 175 WIVGTGIYVD----DIQEEMQAFIYKYLLICIAVWLPVILILGVISRSISAPMADTIAAF 230

Query: 454 QRMSR-DNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHN 512
           + ++R + DLT+RL E G DE++Q+A + N  ++ +Q  +   + +        + +   
Sbjct: 231 ENIARGEGDLTLRLEESGRDELKQVAASFNEFVAKIQALVNSVSASVTHSRELAEGLADI 290

Query: 513 MTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNEL 572
                   +     T SV TA+NEMS + +EV+  AQ AA     A+ +    V+V +  
Sbjct: 291 SAQASMVTANMQAETQSVATAINEMSMASSEVASNAQLAADSAGSADGEADDTVAVVDGA 350

Query: 573 ARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQG 632
              +  ++ ++    +    L   S  I  +LDVI  IAEQTNLLALNAAIEAARAGE G
Sbjct: 351 VAKIKGLSNELEVTADEAQALQISSGKIGQILDVIVGIAEQTNLLALNAAIEAARAGEAG 410

Query: 633 RGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNT 692
           RGFAVVADEVR LA++TQ ST+EI   I+ ++    SV   +  A     + V       
Sbjct: 411 RGFAVVADEVRTLASRTQESTQEINAIIEAIRASVDSVNASVARAKAQSEQTVGETSQVV 470

Query: 693 DMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVN 752
           + L+ I   + ++++MNIQIATATE+Q  V  E+N N+T I+D+S     +  E+ +   
Sbjct: 471 EALQTIKSSIRQISDMNIQIATATEEQSAVIAELNMNVTRINDISLENQQKSEEIGSTSE 530

Query: 753 ELSDEAMELSKRMGQFR 769
           ++   + +L   +  F+
Sbjct: 531 QIKSGSADLESLISTFK 547