Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  206 bits (525), Expect = 2e-57
 Identities = 136/416 (32%), Positives = 225/416 (54%), Gaps = 14/416 (3%)

Query: 360 DKALRGESGLMMESTHASVQLLSAYTP-LDALG-----LRWALVTEMQADEALADIAKLS 413
           DKA+  ++G +  S  +S    +  T  +DAL      L   L+T+ ++  ALA+    +
Sbjct: 255 DKAMSQDAGAL--SGQSSTDWFAKSTARIDALRQFERQLSHHLLTDTRS--ALAN----A 306

Query: 414 DELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDE 473
             L++ V++ +++  ++  L +  +G  +   +R    ++    +  DL+VR+  +G DE
Sbjct: 307 KSLMVSVIVLMLVSGLVVILLSLFIGRYLHASLRHLYHKVTESQKHYDLSVRVDLKGKDE 366

Query: 474 IRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTA 533
           I QL  A N M++  +  I      T  L + +Q +       R  V+  H   D V +A
Sbjct: 367 IGQLGSAFNHMMADFEKVIGMVRTNTQGLLTASQEMEGCARIMREDVALGHSEVDQVASA 426

Query: 534 VNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARL 593
           + EMSA++ E+++ A +A+    +AN++   G       A  +  + Q++A A +AI  L
Sbjct: 427 MTEMSATVQEIAQNAVQASEASAQANKEAKEGSLEVERTADSINELAQEIADAAQAINNL 486

Query: 594 NHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTST 653
           + + + I  VL VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA + QTST
Sbjct: 487 DEDIKGIVDVLGVISGIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRAQTST 546

Query: 654 EEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIA 713
           E+IR+  +RL++  +  V  +E   N     V       + L +IV  ++ ++ MN QIA
Sbjct: 547 EDIRSMTERLERGAKIAVKAMESGRNKAEISVVESKRAGEELIRIVSEVSVIDSMNEQIA 606

Query: 714 TATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
            AT +Q  V+EE+N N   ISD+  +       ++ +   L ++   +S+ + +F+
Sbjct: 607 AATHEQSAVSEEVNQNAMKISDIYRNTHEVSDRLSQLNESLLNDVSAMSELVSKFK 662