Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein (NCBI) from Shewanella oneidensis MR-1

 Score =  218 bits (555), Expect = 7e-61
 Identities = 146/467 (31%), Positives = 241/467 (51%), Gaps = 15/467 (3%)

Query: 313 SQPRLLLEDASAFIGT------LNSLTGDRAAINQIRSKQSAIGLLKVSSQAVDKALRGE 366
           SQ    LEDAS  I           LT + + + Q      A  L   ++Q +++ +   
Sbjct: 79  SQAANALEDASKTIKLHWQKYLATELTKEESQLTQ-----QAAPLFTAANQQIEQLVSYL 133

Query: 367 SGLMMESTHA-SVQLLSAYTPLDALGLRWALVTEMQ---ADEALADIAKLSDELIMKVLI 422
                +  H  + ++L  Y  +D +    + +T +Q   AD+ +A   +L D  I   + 
Sbjct: 134 RSFNGDVAHQLNDKILPLYQVIDPISSTISELTALQIKIADKEIAVDKELYDSSITIFIT 193

Query: 423 AIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALN 482
              +  +++ L    V   +  PI D +  ++ + +D+DLTV+      DE+  ++ +L 
Sbjct: 194 LAGLAILLSILIGLWVKRSVMNPINDIVRNLKTIRQDSDLTVKFHTFNDDELGLISTSLT 253

Query: 483 RMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASIT 542
           +++ HL+  +   A   + + S    ++     T   + +Q   T+   TA+NEM+A++ 
Sbjct: 254 QVIEHLRGILHSIAEAANTVTSSATELSSFTQETNKRMQQQQAETEQTATAMNEMTATVA 313

Query: 543 EVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIAS 602
           EV++    AA   ++A+     G  +  +    M+ +++Q+    + I  L++ESQ+I  
Sbjct: 314 EVAQSTSAAANSAKDADTYAANGNRIVIDSISSMSQLSEQIQKTAQVIGFLSNESQNIGR 373

Query: 603 VLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDR 662
           VLDVI++IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ ST+EI   I  
Sbjct: 374 VLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQKSTQEIEAMIAT 433

Query: 663 LQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGV 722
           LQ+  +  V+ +E     V       +     LK+IV  ++ + E+N  IATA E+Q  V
Sbjct: 434 LQQGVKQAVSAMEVGIKQVDDANNKANQAGQALKEIVASVDNIAELNTHIATAAEEQSSV 493

Query: 723 TEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
            E IN +I +ISD++   T    E++  V  L+  A  +  ++  FR
Sbjct: 494 AENINRSIIAISDITDDATRSALELSESVINLTKLANSMRSQVSAFR 540