Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  203 bits (516), Expect = 2e-56
 Identities = 131/379 (34%), Positives = 203/379 (53%), Gaps = 9/379 (2%)

Query: 394 WALVTEMQADEALADIAKLS-DELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQ 452
           W L+T     +    + ++  D LI+  LI++ I A    L      + I+ P+ D+I  
Sbjct: 172 WTLITGAYLSDVKESLYEVMVDYLIIMFLISVPIFAFFLVL-----NHSITSPLNDAIEA 226

Query: 453 IQRMSR-DNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITH 511
           ++ +++ + DL+ RLS QG DE+  LA A N     + D +         L++  + +  
Sbjct: 227 LEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKLLML 286

Query: 512 NMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNE 571
            +  +  S    H  T SV TAVN+M ++  E++   Q+AA        +      V + 
Sbjct: 287 AVEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAATSVKSQAQQSKGVIDN 346

Query: 572 LARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQ 631
             RD   + Q++ ++     +L   S  I S+LDVI+AIAEQTNLLALNAAIEAARAG  
Sbjct: 347 TVRDTEKLVQELKASEAITQKLGQASGQIGSILDVIRAIAEQTNLLALNAAIEAARAGSH 406

Query: 632 GRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSN 691
           GRGFAVVADEVR LA +TQ ST EI+  I  +Q    SV+    +         A     
Sbjct: 407 GRGFAVVADEVRALANRTQDSTNEIQKIISEIQTGVGSVMQSNSQTQRQSEELQAKAQEA 466

Query: 692 TDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNA-I 750
              +  I++++  +++MN Q+A+ATE+Q  VTEEIN NI +IS+++  V+V+  E N+  
Sbjct: 467 GQAMAAILELIAHISDMNTQLASATEEQSLVTEEINRNICNISELT-EVSVKANESNSRA 525

Query: 751 VNELSDEAMELSKRMGQFR 769
              L D + ++S  +GQF+
Sbjct: 526 AQSLQDISQDMSHTLGQFK 544