Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (501), Expect = 2e-54
 Identities = 125/376 (33%), Positives = 206/376 (54%), Gaps = 4/376 (1%)

Query: 395 ALVTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQ 454
           AL + +  +E + D+A     +++ V +A+   +++A +   +V   +  P+R    +++
Sbjct: 333 ALKSSILLNEKMDDMATSLGSILVIVGLAV---SILAVVTISIVIRSVIAPLRLIQGRVE 389

Query: 455 RM-SRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNM 513
            + S D DLT  +      E+  L +  N  +  L+D I +      +    + +     
Sbjct: 390 NLASADGDLTQSIEVDSHAELIALGKGFNSFIHKLKDLISELKALAGQTQEESLSSAKIA 449

Query: 514 TGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELA 573
             TR+SV  Q+   +SVVTAVNEMSA+  EV++ +++ A   +  ++  H       +  
Sbjct: 450 ELTRDSVHRQYGEIESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVHLSEESLTKAM 509

Query: 574 RDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGR 633
             +T+++Q+   A  A++++   S +I+ +L+VI +IA QTNLLALNAAIEAARAGEQGR
Sbjct: 510 DYVTTMSQESMQAKVAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGR 569

Query: 634 GFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTD 693
           GFAVVADEVR LA+KTQ+ST++I   ID LQKE QS    I++        V+       
Sbjct: 570 GFAVVADEVRALASKTQSSTDDISVLIDALQKEVQSASAIIDKGAERAQMAVSQTEQALT 629

Query: 694 MLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNE 753
            L  +V  + E++     IA A E+Q  VTEE+N NIT ISD ++ +    GE       
Sbjct: 630 SLNSMVSQIEEISAQVTHIAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVV 689

Query: 754 LSDEAMELSKRMGQFR 769
           L++   +  +++G+ +
Sbjct: 690 LAELVKQQHQQLGKLK 705