Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  210 bits (535), Expect = 1e-58
 Identities = 146/432 (33%), Positives = 227/432 (52%), Gaps = 20/432 (4%)

Query: 353 KVSSQAVDKALRGESGLMM--ESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIA 410
           K+    +D A RG+       +  + + Q+      +   G  W L T    D+  A + 
Sbjct: 127 KIIVGLLDAAKRGDGNFSYYYQKPNTNEQIEKISFVMMVPGTDWMLGTGAYIDDIEAVVE 186

Query: 411 K----LSDELIMKVLIAIVIGAVIATLAAWMV---GNGISKPIRDSISQIQRMSR-DNDL 462
                +++++  K L+ ++I  V+    A+++    + +  PI++    +  +++ + DL
Sbjct: 187 DYRQTVTEQMAEKSLMILLIALVLTGATAFVIMVAAHRMVVPIKNMADNLNDIAKGEGDL 246

Query: 463 TVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSE 522
           T RLS +G DEI QL +A N  +  LQ  I   A  T K+ +    I H+ T   +S   
Sbjct: 247 TKRLSVKGEDEIAQLGRAFNLFVDKLQHIIGDVASATAKVKTAANAI-HDQTKVMSSQLL 305

Query: 523 QHER-TDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELA----RDMT 577
            H   TD VVTA+ EMS++ +EV++      T V EA Q   G V+           ++ 
Sbjct: 306 SHNNETDQVVTAITEMSSTASEVAQ----NTTQVAEATQAATGDVANAQRCVDASLEEIA 361

Query: 578 SINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAV 637
           ++ +Q+  A  +I  L+ +SQ I SVL VI  IAEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 362 ALMEQINHAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAV 421

Query: 638 VADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQ 697
           VADEVR+LA++TQ ST EI   +  L K     V  ++E+  + VR V +  + ++ L  
Sbjct: 422 VADEVRSLASRTQASTLEINEMLSALHKLVSQAVKTMDESQQSCVRSVESSRAISESLGS 481

Query: 698 IVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDE 757
           +   +  +N+M+ QIATA  +Q  VTEEIN N+ +I ++   +         +   +S E
Sbjct: 482 VTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEHAARVSQTVSQE 541

Query: 758 AMELSKRMGQFR 769
              L   +GQF+
Sbjct: 542 GTNLGNLVGQFK 553