Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 963 a.a., methyl-accepting chemotaxis protein DcrH (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  345 bits (884), Expect = 9e-99
 Identities = 248/836 (29%), Positives = 394/836 (47%), Gaps = 104/836 (12%)

Query: 1   MKIANKIVLSMTL-LSIFSVVIAGVWVGWSAA--------TLSKQAIYERASNQLLSVRE 51
           M +  K+++   L L +   +IAGV   W  A          + +A+ +RA  QL S+R 
Sbjct: 1   MTLKRKLMVGFILALFVTCTLIAGV--NWYFAHDGMNGIGDTAVEAMKDRARGQLESIRS 58

Query: 52  TKKSEIERYLTRVAGQLVTLANMVSTVEAMESLTQAYQAYPVEQVPASSLSALKDYYTTQ 111
            K   IE    R+  Q  TLA  ++  EA  +L+ AY     E   A    AL+   T  
Sbjct: 59  AKALHIEDLFQRIRNQTRTLAESLTVREAATTLSAAYFTVQGETTGALDAKALRGKLTED 118

Query: 112 F-GQNY---------QKLNDGQDANPLARLSLLSRSAEALQARYI--ASNPNPLGAKHEW 159
           + G NY          +   G    P         +   LQA Y+  + NPNPLG KH  
Sbjct: 119 YAGANYLANPTFATHARTAKGYAPRPAETYLPKDANGIILQAMYVHPSGNPNPLGEKHRL 178

Query: 160 ESDSLGNAYDALHQKYHPGIKQYLEQFGLYDVFMVD-NDGHVVYTVFKELDFATNLLSGP 218
           +++ L + Y+ LH+KYHP ++ YL  FG YD+F++D   G +VYTVFKE D+AT+LL+GP
Sbjct: 179 DANPLASTYNTLHRKYHPILRNYLTTFGYYDIFIIDAASGVIVYTVFKEKDYATSLLTGP 238

Query: 219 YKESGLARAYVQA----KTLANNQYYLDDFAPYYPSYEAAASFISTPIFNG-STRVGVLI 273
           Y+++GL   + +A    +    +   + DFAPY PSY A A+FI+ P+F+   T   VL 
Sbjct: 239 YRDTGLGAVFREAVENGRKGRRDAVSISDFAPYEPSYNAPAAFIAAPVFDDRGTCQAVLA 298

Query: 274 FQMPVDEINSIMTFDSRWKENGLGNTGQSYLVGSDHLMRSQPRLLLEDASAFIGTLNSLT 333
           FQMPVD I+ IMT + RW+E GLG TG++YLVG D   RS                    
Sbjct: 299 FQMPVDNIDRIMTSNGRWQEVGLGTTGETYLVGPDMHPRS-------------------- 338

Query: 334 GDRAAINQIRSKQSAIGLLKVSSQAVDKALRGESGLMMESTHASVQLLSAYTPLDALGLR 393
                  ++R+   A   + V S+A  KAL GESG      +    +L+A+ PL   GL 
Sbjct: 339 -------KLRAASGASDEVVVDSEAARKALGGESGTATIRDYRGKNVLAAWQPLRLEGLH 391

Query: 394 WALVTEMQADEALADIAKLS-------DELIMKVLIAIVIGAVIATLAAWMVGNGISKPI 446
           + L+ E+  DEAL   +K++          +   L+ + +G ++ +  A  +   +S+P+
Sbjct: 392 YGLIAEIDIDEALLAASKITAARQGAEARTLWGTLLVLALGTLLGSGIAIALVGALSRPL 451

Query: 447 R---------------------------------DSISQIQRM----SRDNDLTVRLSEQ 469
           +                                 +S+ Q  RM    +    +    S Q
Sbjct: 452 QRLQVYAGDVAAGNLDARPEGQYPAELDAMRHSIESMVQNLRMRIHEADAKGMEAADSAQ 511

Query: 470 GSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSE----QHE 525
            +      A+A    +  L + +   A     ++ H     +++T   +++++    Q  
Sbjct: 512 AAQAALDKARASETRIKGLMERMTGAAGKARSVSEHVSRSINDLTAQVHTITQGVETQRH 571

Query: 526 RTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMAS 585
           R D    A++ M   +++V++ A+RAA     +      G S   E    +  + +++  
Sbjct: 572 RMDDTAQAMDTMRTMVSDVADNARRAAEQADLSRGHAQQGASGVGEAVASIGQVRERIER 631

Query: 586 AVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNL 645
              A+ARL  E+ SI  V+ VI  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR L
Sbjct: 632 LNTAMARLGEEADSIGKVMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKL 691

Query: 646 AAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNEL 705
           A KT  +T E+ + + R+Q  T+  +  +E A            ++  ++  IV  ++E 
Sbjct: 692 AEKTMQATGEVGSAVTRIQTHTRDNIAAVETAMREATASADAATASGRVMDDIVSRVDET 751

Query: 706 NEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMEL 761
             M   IA A++QQ      +  N+  ++ ++      +      + ++  +  EL
Sbjct: 752 AGMVQSIAAASDQQAAAATMVGRNVEEVNAIAGDTAASMSHFAGTLEDIFSQVQEL 807