Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  227 bits (578), Expect = 2e-63
 Identities = 150/471 (31%), Positives = 254/471 (53%), Gaps = 21/471 (4%)

Query: 300 GQSYLVGSDHLMRSQPRLLLEDASAFIGTLNSLTGDRAAINQIRSKQSAIGLLKVSSQAV 359
           GQ++     +  +++  LLL     F+    + T D +A +++ S      +++      
Sbjct: 183 GQTFFDHFKNAYQAEISLLLPKDGGFVPFGGTFTTDTSAASELESVMQGDEVIRTID--- 239

Query: 360 DKALRGESGLMMESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKLSDELIMK 419
              L G+S  +       ++  S  T     G+    +    +++A++DI     +LIM 
Sbjct: 240 ---LNGKSFALYRH---GIKDYSGKT----FGVLDIALDRSHSEQAMSDIRL---KLIMI 286

Query: 420 VLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSR-DNDLTVRLSEQGSDEIRQLA 478
            +IA++IG  IA    W +   I++PI ++   +  ++  + DLT R+  +  DE+ QLA
Sbjct: 287 GVIALLIGTAIA----WFIAKSITRPIAETTDALNDIAEGEGDLTRRIEVKSKDEMAQLA 342

Query: 479 QALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMS 538
           QA NR    +  T+ Q + +T  L +  + ++     T+   + QH  T+ V TA+NEM+
Sbjct: 343 QAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHLETEQVATAMNEMA 402

Query: 539 ASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQ 598
           A++ EV+  A  AA     A++    G  +  ++   ++ +  ++A A  AI  L   + 
Sbjct: 403 ATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQAANAINELERNTT 462

Query: 599 SIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRT 658
            I SVL VI+ IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA++TQ ST EI+ 
Sbjct: 463 QIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTTEIQQ 522

Query: 659 KIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQ 718
            I+ LQ+  ++ V+ +  +  T    V+  H     L+ I   ++ +++MNIQIA+A  +
Sbjct: 523 MIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTISQMNIQIASAANE 582

Query: 719 QRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           Q  V+ EIN N+ +I+D++ + T    +     +EL+  +M L+  + QF+
Sbjct: 583 QCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLSMRLTTLLSQFK 633