Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  218 bits (555), Expect = 7e-61
 Identities = 145/380 (38%), Positives = 214/380 (56%), Gaps = 25/380 (6%)

Query: 397 VTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRM 456
           VTE   D++ A        L++ +L+A +   VI   A  MV      PI++    +  +
Sbjct: 192 VTEQMIDKSYAI-------LLIALLLAAITAPVILVTAQRMV-----TPIKNMADNLNDI 239

Query: 457 SR-DNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTG 515
           ++ + DLT RL+ +G DEI QL ++ N  +  LQ  I   AH T K+ +    I H+ T 
Sbjct: 240 AKGEGDLTKRLAVKGDDEIAQLGRSFNLFVDKLQTIIGDVAHATAKVKTAANAI-HDQTK 298

Query: 516 --TRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELA 573
             +R  +S  +E TD VVTA+ EMSA+ +EV++      T V EA     G V+      
Sbjct: 299 VMSRQLISHNNE-TDQVVTAITEMSATASEVAQ----NTTQVAEATHAATGDVANAQRCV 353

Query: 574 ----RDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAG 629
                +++++  Q+ +A   I  L+ +SQ I SVL VI  IAEQTNLLALNAAIEAARAG
Sbjct: 354 DASLEEISALMAQINNAASNIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAG 413

Query: 630 EQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCH 689
           EQGRGFAVVADEVRNLA++TQ+ST EI   +  L K     V  +EE+  + +R V +  
Sbjct: 414 EQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVSLAVKTMEESQQSCIRSVDSSR 473

Query: 690 SNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNA 749
           + ++ L  +   +  +N+M+ QIATA  +Q  VTEEIN N+ +I ++   +     E  +
Sbjct: 474 AISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEEAAS 533

Query: 750 IVNELSDEAMELSKRMGQFR 769
           +   +S E + L K +GQF+
Sbjct: 534 VSQTVSQEGLNLGKLVGQFK 553