Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  219 bits (559), Expect = 2e-61
 Identities = 152/433 (35%), Positives = 230/433 (53%), Gaps = 22/433 (5%)

Query: 353 KVSSQAVDKALRGESGLMM--ESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIA 410
           K+    +D A RG+       +  + + Q+      +   G  W L T    D+  A + 
Sbjct: 127 KIIVGLLDAAKRGDGNFSYYYQKPNTNEQIEKISYVMMVPGTDWMLGTGAYIDDIEAVVE 186

Query: 411 --------KLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSR-DND 461
                   +++D+  M +LIA+V+  + A +   +  + +  PI++    +  +++ + D
Sbjct: 187 DYRQTVTEQMADKSFMILLIALVLTGITAFIIM-VAAHRMVVPIKNMADSLNDIAKGEGD 245

Query: 462 LTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVS 521
           LT RLS +G DEI QL QA N  +  LQ  I   A+ T K+ S    I H+ T   +S  
Sbjct: 246 LTKRLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAI-HDQTKVMSSQL 304

Query: 522 EQHER-TDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELA----RDM 576
             H   TD VVTA+ EMS++ +EV++      T V EA Q   G V+           ++
Sbjct: 305 LSHNNETDQVVTAITEMSSTASEVAQ----NTTQVAEATQAATGDVANAQRCVDASLEEI 360

Query: 577 TSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFA 636
             +  Q+ +A  +I  L+ +SQ I SVL VI  IAEQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 361 AGLMSQINNAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFA 420

Query: 637 VVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLK 696
           VVADEVRNLA++TQ ST EI   +  L K     V  ++E+  + VR V +  + ++ L 
Sbjct: 421 VVADEVRNLASRTQASTLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLG 480

Query: 697 QIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSD 756
            +   +  +N+M+ QIATA  +Q  VTEEIN N+ +I ++   +     +   +   +S 
Sbjct: 481 SVTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQTVSQ 540

Query: 757 EAMELSKRMGQFR 769
           E + L K +GQF+
Sbjct: 541 EGINLGKLVGQFK 553