Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  230 bits (587), Expect = 1e-64
 Identities = 147/461 (31%), Positives = 242/461 (52%), Gaps = 22/461 (4%)

Query: 329 LNSLTGDRAAINQIRSKQSAIGLLKVSSQAVDKA-----------------LRGESGLMM 371
           +N+L   ++ +NQ   K  +  L K  SQ   +A                 LRG +G ++
Sbjct: 82  INALESAKSTVNQRWQKYLSTELTKEESQLAQQAERLFTPANEQIEQLITYLRGLNGDVV 141

Query: 372 ESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKLSDELIMKVLIAIVIGAV-- 429
              +  +  L  Y  +D +  + + + ++Q   A  +   ++      + I I +  +  
Sbjct: 142 HQLNDKI--LPLYNAIDPISGKVSELIDLQIKIAGQEKDAVNGIYQSSISIFITLAGIAM 199

Query: 430 -IATLAAWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALNRMLSHL 488
            I+ +    V   +  PIRD +  ++ + +D+DLTV+      DE+ Q++ +L +++ HL
Sbjct: 200 LISIVIGLWVNRSVMNPIRDIVENLKTIRQDSDLTVKFKTFNDDELGQISTSLTQVIEHL 259

Query: 489 QDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFA 548
           +  +   A   + +NS    ++     T   + +Q   T+   TA+NEM+A++ EV++ A
Sbjct: 260 RGILHSIAEAANTVNSSATELSSFTQATNKRMQQQQAETEQTATAMNEMTATVAEVAQSA 319

Query: 549 QRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQ 608
             AA   ++A+     G  +  +    M+ +++Q+    + I  L++ESQ+I  VLDVI+
Sbjct: 320 AAAADSAKDADSYAANGNHIVMQSITSMSQLSEQIQKTAQVIGFLSNESQNIGRVLDVIK 379

Query: 609 AIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQ 668
           +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ ST+EI   I  LQ+  +
Sbjct: 380 SIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQKSTQEIEAMIATLQQGVK 439

Query: 669 SVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINA 728
             VN +E   N V       +     LK+IV  ++ + E+N  IATA E+Q  V E IN 
Sbjct: 440 EAVNAMEVGINQVDDANDKANQAGQALKEIVASVDNITELNTHIATAAEEQSSVAESINR 499

Query: 729 NITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           +I +ISD++   T    E++  V  L+  A  +  ++  FR
Sbjct: 500 SIIAISDIAEHSTNSALELSESVLNLTKLANSMRNQVSAFR 540