Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  204 bits (518), Expect = 1e-56
 Identities = 131/379 (34%), Positives = 205/379 (54%), Gaps = 9/379 (2%)

Query: 394 WALVTEMQADEALADI-AKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQ 452
           W L+T     +    + A + D LI+  LI++ I A    L      + I+ P+ D+I  
Sbjct: 172 WTLITGAYLSDVKQSLKAVIIDYLIIMFLISVPIFAFFLVL-----NHSITSPLNDAIDA 226

Query: 453 IQRMSR-DNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITH 511
           ++ +++ + DL+ RLS QG DE+  LA A N     + D +         L++  + +  
Sbjct: 227 LEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKQLML 286

Query: 512 NMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNE 571
            +  +  S    H  T SV TAVN+M ++  E++   Q+AA        +     +V ++
Sbjct: 287 AVEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAANSVKNQAQQSQAVIDD 346

Query: 572 LARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQ 631
             RD   + Q++ ++     +L   S  I S+LDVI++IAEQTNLLALNAAIEAARAG  
Sbjct: 347 TVRDTEKLVQELRASEVITQKLGQSSAQIGSILDVIRSIAEQTNLLALNAAIEAARAGSH 406

Query: 632 GRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSN 691
           GRGFAVVADEVR LA +TQ ST EI+  I  +Q    SV+    +         A     
Sbjct: 407 GRGFAVVADEVRALANRTQDSTNEIQKIISDIQMGVNSVMKSNSQTQTQSDELQAKAREA 466

Query: 692 TDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNA-I 750
            + +  I+ ++  +++MN Q+A+ATE+Q  VTEEIN NI +IS+++  V+V+  E N+  
Sbjct: 467 GNAMAAILQLIAHISDMNTQLASATEEQSLVTEEINRNICNISELT-EVSVKANEGNSRA 525

Query: 751 VNELSDEAMELSKRMGQFR 769
              L D + ++S  +GQF+
Sbjct: 526 AQSLQDISQDMSHTLGQFK 544