Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  193 bits (491), Expect = 2e-53
 Identities = 122/350 (34%), Positives = 185/350 (52%), Gaps = 2/350 (0%)

Query: 420 VLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQ 479
           VL+ + +  V+  L +  V   +   +    S + +  +  DL+VRL++  SDE  +LA 
Sbjct: 313 VLVTLTVVLVLVLLLSLSVIRYLHDSVHHVYSTVTKARKHYDLSVRLTQNSSDEFGELAI 372

Query: 480 ALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSA 539
           A N M++  +  I Q   +  KL    + +          V   H   + V +A+ EMSA
Sbjct: 373 AFNDMMNDFESVILQVRASASKLQQAVEQMDVCTHAMEQDVMAGHSEAEQVASAMTEMSA 432

Query: 540 SITEVSEFAQRAATFVQEANQKGHGG-VSVGNELARDMTSINQQMASAVEAIARLNHESQ 598
           ++ E++  A  A+     AN +   G + VG   A  + ++   +  A +AI  L+ E  
Sbjct: 433 TVAEIASNAVNASEASTAANHEAKAGNIEVGRTSAA-IKALANDIDGASKAINELDREIH 491

Query: 599 SIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRT 658
            I  VLDVI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA ++QTST +I+ 
Sbjct: 492 GIVVVLDVISGIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRSQTSTSDIKN 551

Query: 659 KIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQ 718
             DRL+      V  +E         V         LK+IV+ ++ ++ MN QIATAT +
Sbjct: 552 MTDRLKSGASIAVKAMERGLMQANNSVHEAEQAGIELKRIVEQVDIIDRMNEQIATATHE 611

Query: 719 QRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQF 768
           Q  V+E++N N   IS++  +      E+  +   L+ +A  +SK + +F
Sbjct: 612 QSAVSEDVNRNALKISEIYLNTQRISDELRELTKALTYDAALMSKEVNKF 661