Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  223 bits (567), Expect = 3e-62
 Identities = 141/371 (38%), Positives = 210/371 (56%), Gaps = 6/371 (1%)

Query: 399 EMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSR 458
           ++QA E      ++S  + +  L+AIV   VIA     ++ N I + I D I+ I  +  
Sbjct: 177 DLQASEQATTQTQIS--VTIATLVAIV-ALVIAYFGPKIIVNAI-RDITDRINDI--VDG 230

Query: 459 DNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRN 518
           D +LT R+     DEI +LA A N  ++ LQ  +      T  ++   + +    T T  
Sbjct: 231 DGNLTQRIPITRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTTIG 290

Query: 519 SVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTS 578
              EQ +  D++VTAVNEMSA++ EV+  A   AT + + N +   G ++  +    +  
Sbjct: 291 ISYEQEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVNHIQQ 350

Query: 579 INQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVV 638
           +++ +  AV  I +L+  S +IASVLDVI++IAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 351 LSESVKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVV 410

Query: 639 ADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQI 698
           ADEVR LA++T+TST++I+  I+ LQ+     V  IE   +     V       D L +I
Sbjct: 411 ADEVRTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDEI 470

Query: 699 VDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEA 758
           ++  ++++EM+ Q ATATE+Q  VTEEIN N+T +SD +      + E   IV       
Sbjct: 471 LNSTSKVSEMSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQTIC 530

Query: 759 MELSKRMGQFR 769
             L K + +F+
Sbjct: 531 SNLQKEVSRFK 541