Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LyrR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  159 bits (401), Expect = 1e-43
 Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 4/290 (1%)

Query: 14  RLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTAAG 73
           +L  M  F  V    S T AA+ L +SR  VS+H++++E+ L   LLHRTTRR+SLT  G
Sbjct: 5   QLYRMLVFASVVEQGSLTMAAEVLGISRSMVSQHLKKLEERLGCELLHRTTRRISLTEDG 64

Query: 74  EEALQRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQVH 133
            E    C ++L    + E         L GS+R++AP+GL ++ LL  +  F   +P + 
Sbjct: 65  REFFHYCGELLQLARQAEAVTRPADEHLHGSLRVTAPVGLGEHNLLPLIGDFHRRYPNIR 124

Query: 134 FDVLASDRFSQLVDERVDIALRFTQQPDENLIARRLLEVGMVVCATQEYLAQHAPIELPQ 193
             ++  D    L++ ++D+A++     D    A +L      + A+ EY+A H     P 
Sbjct: 125 LTLMLEDSKLNLLEHQIDVAIQAGWPEDSEFRAIKLGSFDEQLVASPEYVAAHGKPLHPD 184

Query: 194 DLTHHNCLVHISGN---KWDFVK-NNEQFSVLVNGNIRANDMGTLCRAALNHKGIIRLPC 249
           +L HH  L H SG+    W       E+F V +   I  N    L   AL   G+  LP 
Sbjct: 185 NLQHHQWLAHASGHLPKTWTLHNGQGEEFRVRITPFISCNSTNGLIAMALQGLGVAILPD 244

Query: 250 DLANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFLAER 299
           +L N  L +G L+ LLPDY+L    ++A++  +    P VR F+DFL ER
Sbjct: 245 NLVNEHLASGALELLLPDYHLREGGVYALHPYKENTPPRVRVFLDFLKER 294