Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  348 bits (892), Expect = e-100
 Identities = 172/294 (58%), Positives = 219/294 (74%)

Query: 12  MDRLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTA 71
           MD+++A+RSF+EVA+  SFTQAA+ L LSRLQVSRH+QE+E WL  RLLHRTTR VSL+ 
Sbjct: 1   MDKISAIRSFVEVASCGSFTQAAEQLGLSRLQVSRHIQEVERWLGLRLLHRTTRSVSLSV 60

Query: 72  AGEEALQRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQ 131
            GEEA   C++IL +   L+ RA      L GSIRI++PIGL Q +L DAV  FT  HP+
Sbjct: 61  QGEEAFIYCQKILDEVAALQNRAQRHRQELVGSIRIASPIGLGQALLFDAVDDFTREHPE 120

Query: 132 VHFDVLASDRFSQLVDERVDIALRFTQQPDENLIARRLLEVGMVVCATQEYLAQHAPIEL 191
           V   +  SD   QLVDERVDIALR+TQQPDE+LIARRL+ +  V+CA+ +YLA H PI  
Sbjct: 121 VKVQLQLSDEMVQLVDERVDIALRYTQQPDESLIARRLMHIDSVLCASPDYLAGHEPITS 180

Query: 192 PQDLTHHNCLVHISGNKWDFVKNNEQFSVLVNGNIRANDMGTLCRAALNHKGIIRLPCDL 251
             D+T HNCL+H S  +W FVK+N+     ++GN++ANDMG L +AA+  KG+I LPCDL
Sbjct: 181 LDDITAHNCLLHASQTRWLFVKDNQNIEKKISGNLQANDMGVLIKAAMRGKGLIHLPCDL 240

Query: 252 ANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFLAERWQEDLL 305
           AN  L +G+L  LLP+Y+LP  ++WAVYLSRSYQ  L+R FIDFLAERWQ+D+L
Sbjct: 241 ANAHLASGELVELLPEYHLPGKTLWAVYLSRSYQQHLIRHFIDFLAERWQQDIL 294