Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  191 bits (484), Expect = 2e-53
 Identities = 112/299 (37%), Positives = 163/299 (54%), Gaps = 14/299 (4%)

Query: 12  MDRLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTA 71
           MDRL A + F+ +    S   AA+ L++SR  V+R++ E+E+W   RLLHR+TRR+SLT+
Sbjct: 1   MDRLEAAKVFVTIVERGSMIGAAEVLDMSRSMVTRYLSEMEEWSGARLLHRSTRRLSLTS 60

Query: 72  AGEEALQRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQ 131
           AGE+ L  C+++L    E+   +  QS   RG +RIS    +   +L   V+ +   +PQ
Sbjct: 61  AGEQVLDYCQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLILPTVVRPYLAQYPQ 120

Query: 132 VHFDVLASDRFSQLVDERVDIALRFTQQPDENLIARRLLEVGMVVCATQEYLAQHAPIEL 191
              +   S +   LV ER+D+A+R T + D +LIARRL E   VVCA   YLA H+PI  
Sbjct: 121 ASVNFHVSSQTVDLVAERIDMAIRITNELDPSLIARRLGECESVVCAAPRYLASHSPIIQ 180

Query: 192 PQDLTHHNCLV--HISGNKWDFVKNN------------EQFSVLVNGNIRANDMGTLCRA 237
           P+DLT HNCL   +     W F + N            +QF++ V GN+ AND   +  A
Sbjct: 181 PEDLTRHNCLTYSYFGDVMWRFTQINHLVTHPDGKSAGQQFNIPVKGNLSANDSMVVLNA 240

Query: 238 ALNHKGIIRLPCDLANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFL 296
            L  +GI   P       L +G+L  LL D+   S  ++ VY SR +  P +R  +D L
Sbjct: 241 TLAGEGIAMQPVWAVKSYLNSGELVPLLRDFKPQSLGVYGVYQSRKHMQPTLRVMMDML 299