Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  184 bits (466), Expect = 3e-51
 Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 14/303 (4%)

Query: 12  MDRLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTA 71
           MDRL A + F+ +    S   AA+ L++SR  V+R++ E+E+W   RLLHR+TRR+SLT 
Sbjct: 1   MDRLEAAKVFVTIVERGSMIGAAEALDMSRSMVTRYLAEMEEWSGARLLHRSTRRLSLTD 60

Query: 72  AGEEALQRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQ 131
           AGE+ L  C+++L    E+   +  QS   RG +RIS    +   +L   V+ +   +PQ
Sbjct: 61  AGEQVLDYCQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLLLPSVVRPYLAQYPQ 120

Query: 132 VHFDVLASDRFSQLVDERVDIALRFTQQPDENLIARRLLEVGMVVCATQEYLAQHAPIEL 191
              +   + +   LV ER+D+A+R T + D  LIARRL E   VVCA   YLA H+ I  
Sbjct: 121 ASVNFHVTSQTVDLVAERIDLAIRITNELDPTLIARRLGECESVVCAAPSYLASHSAITH 180

Query: 192 PQDLTHHNCLV--HISGNKWDFVKN------------NEQFSVLVNGNIRANDMGTLCRA 237
           P+DLT HNCL   +     W F +              + F++ V GN+ AND   +  A
Sbjct: 181 PEDLTRHNCLTYSYFGDVMWRFTQTPIAVKATPTQEVGQIFNIPVKGNLSANDSMVVLNA 240

Query: 238 ALNHKGIIRLPCDLANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFLA 297
            L  +GI   P   A P L +G L  LL ++   S  ++ VY SR +  P +R  +D L 
Sbjct: 241 TLAGEGIAMQPLWAAKPHLDSGALVPLLREFKPQSLGVYGVYQSRKHMQPALRVMMDMLV 300

Query: 298 ERW 300
           + +
Sbjct: 301 QHF 303