Pairwise Alignments

Query, 143 a.a., YccF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 135 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  195 bits (495), Expect = 3e-55
 Identities = 88/130 (67%), Positives = 106/130 (81%)

Query: 1   MLRTLGNIIWFLCGGIVMGLAWWLVGVLAFISIIGIPWGRACFVIGNFSFWPFGYEAISR 60
           +LR + NI WF+ GG VMGLAWWL GVL FISIIGIP+GRACFVIG  +FWPFG + +SR
Sbjct: 3   LLRLIFNIAWFVLGGFVMGLAWWLAGVLCFISIIGIPFGRACFVIGEMAFWPFGQDHVSR 62

Query: 61  DELTDQTDIGTSGFGVLGNIIWFILAGFWLAVGHILSAVACFITIIGIPFALQHLKLAVI 120
            ELT   D+GT   G++GN+IWF+L G WLA+GHI  A+ACFITIIGIPF +QHLKLA++
Sbjct: 63  RELTGLEDLGTGPLGMVGNVIWFLLFGIWLAIGHIGHALACFITIIGIPFGIQHLKLALL 122

Query: 121 SLAPIGKTVV 130
           SL PIG+TVV
Sbjct: 123 SLTPIGRTVV 132



 Score = 45.1 bits (105), Expect = 4e-10
 Identities = 22/56 (39%), Positives = 31/56 (55%)

Query: 79  NIIWFILAGFWLAVGHILSAVACFITIIGIPFALQHLKLAVISLAPIGKTVVPIEE 134
           NI WF+L GF + +   L+ V CFI+IIGIPF      +  ++  P G+  V   E
Sbjct: 9   NIAWFVLGGFVMGLAWWLAGVLCFISIIGIPFGRACFVIGEMAFWPFGQDHVSRRE 64



 Score = 39.7 bits (91), Expect = 2e-08
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 2   LRTLGNIIWFLCGGIVMGLAWWLVGVLAFISIIGIPWGRACFVIGNFSFWPFGYEAISR 60
           L  +GN+IWFL  GI + +      +  FI+IIGIP+G     +   S  P G   ++R
Sbjct: 76  LGMVGNVIWFLLFGIWLAIGHIGHALACFITIIGIPFGIQHLKLALLSLTPIGRTVVTR 134