Pairwise Alignments

Query, 143 a.a., YccF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 135 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  196 bits (498), Expect = 1e-55
 Identities = 85/130 (65%), Positives = 107/130 (82%)

Query: 1   MLRTLGNIIWFLCGGIVMGLAWWLVGVLAFISIIGIPWGRACFVIGNFSFWPFGYEAISR 60
           +LR + NI WF+ GG VMGLAWWL G+L FISIIGIP+GRACFVIG  +FWPFG E ++R
Sbjct: 3   LLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGELTFWPFGQEQMNR 62

Query: 61  DELTDQTDIGTSGFGVLGNIIWFILAGFWLAVGHILSAVACFITIIGIPFALQHLKLAVI 120
             LT + D+GT  FG++GNIIWF+L G WLA+GH+  A+ACF+TIIGIPF +QHLKLA++
Sbjct: 63  RHLTGREDLGTGAFGMVGNIIWFLLFGIWLAIGHLAHALACFVTIIGIPFGIQHLKLALL 122

Query: 121 SLAPIGKTVV 130
           SL PIG+T+V
Sbjct: 123 SLTPIGQTIV 132



 Score = 39.7 bits (91), Expect = 2e-08
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 5   LGNIIWFLCGGIVMGLAWWLVGVLAFISIIGIPWGRACFVIGNFSFWPFGYEAISR 60
           +GNIIWFL  GI + +      +  F++IIGIP+G     +   S  P G   +++
Sbjct: 79  VGNIIWFLLFGIWLAIGHLAHALACFVTIIGIPFGIQHLKLALLSLTPIGQTIVAK 134