Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) from Pseudomonas fluorescens FW300-N2E2

 Score =  122 bits (306), Expect = 8e-33
 Identities = 77/255 (30%), Positives = 136/255 (53%), Gaps = 22/255 (8%)

Query: 40  IHYQWHWREAWTLIFTPRADGS---LPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQ 96
           ++Y W W     + F     GS   L +++ GLG T+ +++   ++AL+LGS++G+ R+ 
Sbjct: 1   MNYNWDWG----VFFKSTGVGSETYLDWYVSGLGWTIAIAIVAWIIALLLGSILGVMRTV 56

Query: 97  KAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWL 156
               V   A  +V+L RN+P LV +FI+YF     L+P L   ++  ++  +++P  +  
Sbjct: 57  PNRLVSGIATCYVELFRNVPLLVQLFIWYF-----LVPDLLPADMQEWYKQDLNPTTS-- 109

Query: 157 FGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIA 216
                     LS V+C+GL ++A + E VR G+  +P+GQ  AA ++G      Y  V+ 
Sbjct: 110 --------AYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLL 161

Query: 217 PQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLV 276
           PQ    I P L  + +++ K++S+ SLI + EL     + A  S  +FE + +    Y  
Sbjct: 162 PQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFT 221

Query: 277 LCLTLSMLFKQVEKR 291
           L ++L +L + VEK+
Sbjct: 222 LNMSLMLLMRMVEKK 236