Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., ABC transporter for D-Glucosamine Hydrochloride, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (291), Expect = 4e-31
 Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 28/226 (12%)

Query: 66  LQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFY 125
           L GLG  L L+L  + +  V+G  +  A   K   +R+ A+ +V ++RN P LV + + Y
Sbjct: 18  LAGLGLGLSLALVSIAIGCVIGLAMAFALLSKHRVLRVLASVYVTVIRNTPILVLILLIY 77

Query: 126 FFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIV 185
           F      +P LG+                      RL + L S V+ + L + AY+ E+ 
Sbjct: 78  F-----ALPSLGI----------------------RL-DKLPSFVITLSLYAGAYLTEVF 109

Query: 186 RAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLIS 245
           R GL +I +GQ EA  ++GL  W    YV  P +L  + PAL+   ISL KDTS+ + I+
Sbjct: 110 RGGLLSIHKGQREAGLAIGLGEWQVKAYVTVPVMLRNVLPALSNNFISLFKDTSLAAAIA 169

Query: 246 IQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
           + ELT+   +I   S  + E WL+  A Y+  C  ++ML +  E+R
Sbjct: 170 VPELTYYARKINVESYRVIETWLVTTALYVAACYLIAMLLRYFEQR 215