Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  129 bits (325), Expect = 7e-35
 Identities = 85/226 (37%), Positives = 120/226 (53%), Gaps = 29/226 (12%)

Query: 66  LQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFY 125
           L GL  TL LSL   VL L++G   G+ R      +R  +  +++LVR  P LV +FIFY
Sbjct: 118 LWGLWTTLWLSLVSGVLGLLIGLATGLCRLSNNPTLRDLSTVYIELVRGTPLLVQIFIFY 177

Query: 126 FFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIV 185
           FFI   L        L R                        +G+  + L + AY+AEI+
Sbjct: 178 FFIGTVL-------NLSRE----------------------FAGIAALSLFTGAYVAEII 208

Query: 186 RAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLIS 245
           R+G+ +I +GQ EAA SLGL      R+V+ PQ    + P LAGQ ISL+KDTS++S+I+
Sbjct: 209 RSGVQSIARGQNEAARSLGLSAGQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIA 268

Query: 246 IQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
           I EL   G E+  +S   FEI   V   YL++ L LS +  ++E+R
Sbjct: 269 ITELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKIASRLERR 314