Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., ectoine/hydroxyectoine ABC transporter, permease protein EhuD from Pseudomonas stutzeri RCH2

 Score =  108 bits (271), Expect = 8e-29
 Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 28/230 (12%)

Query: 62  LPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFV 121
           LP  L     T+ ++L G  +A+VLG  + I R  +  ++  P    ++ +R+ P L+ V
Sbjct: 13  LPRLLDASLTTIGIALAGFAIAVVLGLFLAIGRRSRLRWLSWPITGLIEFIRSTPLLIQV 72

Query: 122 FIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYI 181
           +  ++   N  + L  +                             +G++ I L  + Y 
Sbjct: 73  YFLFYVFPNYGLNLSAMQ----------------------------AGIIGIALHYACYT 104

Query: 182 AEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSII 241
           AE+ RAGL  +P+ QWEA  +L +  W  YR VI PQ L  + PAL    IS++KDT ++
Sbjct: 105 AEVYRAGLDAVPRSQWEAVTALNMKPWTAYRDVILPQALRPVLPALGNYLISILKDTPVL 164

Query: 242 SLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
           S I++ E+      I + S    E   +VG  +L+L L L+   +++E R
Sbjct: 165 SAITVVEIMQRAKNIGSESFRYLEPITMVGIFFLILSLGLAWCVRRLENR 214