Pairwise Alignments
Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056
Subject, 220 a.a., amino acid ABC transporter membrane protein 1, PAAT family from Pseudomonas syringae pv. syringae B728a
Score = 121 bits (303), Expect = 2e-32
Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 37/252 (14%)
Query: 40 IHYQWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAW 99
++YQ ++ W P L GLG L L+L + + V+G A +
Sbjct: 1 MNYQLNFDAVWR---------DFPSLLAGLGLGLELALISIAIGCVIGLANAFALLSRYK 51
Query: 100 FVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGP 159
+R+ A+ +V +VRN P LV + + YF +P LG+
Sbjct: 52 ALRIVASVYVTVVRNTPILVLILLIYF-----ALPGLGI--------------------- 85
Query: 160 ARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQV 219
RL + L S ++ + L + AY+ E+ RAGL +I +GQ EA ++GL W Y+I P +
Sbjct: 86 -RL-DKLASFIVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVM 143
Query: 220 LTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCL 279
L + PAL+ ISL KDTS+ + I++ ELT+ +I S + E WL+ A Y+V C
Sbjct: 144 LRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVVACY 203
Query: 280 TLSMLFKQVEKR 291
+++L + +E+R
Sbjct: 204 VIALLLRTLEQR 215